BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004B06SP1|AL425229
(951 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1158 1828 0.0
>3x_Contig1158
Length = 4503
Score = 1828 bits (917), Expect = 0.0
Identities = 942/953 (98%), Gaps = 2/953 (0%)
Strand = Plus / Minus
Query: 1 attatagaggtgattgcacttctgcctcctattgagtttcttttccgttcacaaccagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3471 attatagaggtgattgcacttctgcctcctattgagtttcttttccgttcacaaccagtg 3412
Query: 61 tgagatccctttagttttcactcttgtctacctctctgtagtaaagaaatgtaaaacgat 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3411 tgagacccctttagttttcactcttgtctacctctctgtagtaaagaaatgtaaaacgat 3352
Query: 121 atctgttcttttatttcttagcgtttttttaattttggaatttattttttttttttttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3351 atctgttcttttatttcttagcgtttttttaattttggaatttattttttttttttttaa 3292
Query: 181 atttcccaaaatttcggtagaccactttatctttctctctccaatggttatattataaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3291 atttcccaaaatttcggtagaccactttatctttctctctccaatggttatattataaaa 3232
Query: 241 ctggaaaacacagccgagtgatgaaacgttttactctagacaataatccctggctacttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3231 ctggaaaacacagccgagtgatgaaacgttttactctagacaataatccctggctacttc 3172
Query: 301 ttatcaaagcagtatatcaacgacttttgttgtagatttgaccctttctgtctttctttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3171 ttatcaaagcagtatatcaacgacttttgttgtagatttgaccctttctgtctttctttc 3112
Query: 361 tttctgtctttctttctttctgtcttgctcccccaaagactaaaactatttactttattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3111 tttctgtctttctttctttctgtcttgctcccccaaagactaaaactatttactttattt 3052
Query: 421 ctcaaagtgtgtattgattttccgtcttatttttcttgattgtaaaactggaaactccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3051 ctcaaagtgtgtattgattttccgtcttatttttcttgattgtaaaactggaaactccaa 2992
Query: 481 atacagttataactccaggcagaactattgaaatgacgaaccaaaaacaaaaacaaaatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2991 atacagttataactccaggcagaactattgaaatgacgaaccaaaaacaaaaacaaaatt 2932
Query: 541 tcacaatcctatctaaatcgtcccgacctgtgattaagcttcccttctaactctctgtat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2931 tcacaatcctatctaaatcgtcccgacctgtgattaagcttcccttctaactctctgtat 2872
Query: 601 gtgatttattcgctcaattttgatccagttaaaagtaataaaaagcgtcttgttatattg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2871 gtgatttattcgctcaattttgatccagttaaaagtaataaaaagcgtcttgttatattg 2812
Query: 661 ttttgtataccccgttttttatccttcggcttccacacttcgtcgatcctagcctagctc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2811 ttttgtataccccgttttttatccttcggcttccacacttcgtcgatcctagcctagctc 2752
Query: 721 tgtatccccsagttctagttccctgcagttcttccaactcttgaccagcggctgaacaga 780
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2751 tgtatccccgagttctagttccctgcagttcttccaactcttgaccagcggctgaacaga 2692
Query: 781 agtgtatcccaagaatatacaaagagataccggcaaagtatcacgctgcacaaagggtta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2691 agtgtatcccaagaatatacaaagagataccggcaaagtatcacgctgcacaaagggtta 2632
Query: 841 gaagattaamaasgctttcastttasttttatttcamttttttttctcmagtttccttga 900
||||||||| || ||||||| |||| |||||||||| ||||||||||| |||||||||||
Sbjct: 2631 gaagattaaaaaggctttcagtttagttttatttcaattttttttctcaagtttccttga 2572
Query: 901 aattaatgctcacctstttgtcctggtgtgt-agttccaaa-cccagccactg 951
||||||||||||||| ||||||||||||||| ||||||||| |||||||||||
Sbjct: 2571 aattaatgctcacctgtttgtcctggtgtgtcagttccaaaccccagccactg 2519
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 17,212
Number of Sequences: 1807
Number of extensions: 17212
Number of successful extensions: 549
Number of sequences better than 1.0e-20: 1
length of query: 951
length of database: 10,358,551
effective HSP length: 16
effective length of query: 935
effective length of database: 10,329,639
effective search space: 9658212465
effective search space used: 9658212465
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)